Nicholas Owen
Nicholas Owen
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RNA-seq
Identification of 4 novel human ocular coloboma genes ANK3, BMPR1B, PDGFRA, and CDH4 through evolutionary conserved vertebrate gene analysis
Purpose: Ocular coloboma arises from genetic or environmental perturbations that inhibit optic fissure (OF) fusion during early eye development. Despite high genetic heterogeneity, 70% to 85% of patients remain molecularly undiagnosed. In this study, we have identified new potential causative genes using cross-species comparative meta-analysis.
Nicholas Owen
,
M Toms
,
RM Young
,
J Eintracht
,
H Sarkar
,
BP Brooks
,
M Moosajee
,
Genomics England Research Consortium
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DOI
Testicular somatic cell-like cells derived from embryonic stem cells induce differentiation of epiblasts into germ cells
Regeneration of the testis from pluripotent stem cells is a real challenge, reflecting the complexity of the interaction of germ cells and somatic cells. Here we report the generation of testicular somatic cell-like cells (TesLCs) including Sertoli cell-like cells (SCLCs) from mouse embryonic stem cells (ESCs) in xeno-free culture. We find that Nr5a1/SF1 is critical for interaction between SCLCs and PGCLCs. Intriguingly, co-culture of TesLCs with epiblast-like cells (EpiLCs), rather than PGCLCs, results in self-organised aggregates, or testicular organoids.
H Rore
,
Nicholas Owen
,
RE Piña-Aguilar
,
K Docherty
,
R Sekido
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DOI
Omic's : from data to patients
Research Networking Event
Feb 17, 2021 2:00 PM — 2:45 PM
Institute of Ophthalmology
Nicholas Owen
Project
Project
From Transcriptomics to Treatment in Inherited Optic Neuropathies
Inherited optic neuropathies, including Leber Hereditary Optic Neuropathy (LHON) and Dominant Optic Atrophy (DOA), are monogenetic …
MJ Gilhooney
,
Nicholas Owen
,
M Moojajee
,
P Yu Wai Man
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DOI
Zebrafish retinal mRNA RNA-seq data processing
This protocol details the step-by-step procedures followed to process zebrafish retinal mRNA sequencing data generated by the SMARTSeq2 …
Nicholas Owen
,
M Moosajee
DOI
Transcriptome profiling of zebrafish optic fissure fusion
Incomplete fusion of the optic fissure leads to ocular coloboma, a congenital eye defect that affects up to 7.5 per 10,000 births and …
R Richardson
,
Nicholas Owen
,
M Toms
,
R Young
,
D Tracey-White
,
M Moosajee
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Dataset
DOI
Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery
Fibrosis-related events play a part in most blinding diseases worldwide. However, little is known about the mechanisms driving this complex multifactorial disease. Here we have carried out the first genome-wide RNA-Sequencing study in human conjunctival fibrosis…
C Yu-Wai-Man
,
Nicholas Owen
,
J Lees
,
AD Tagalakis
,
SL Hart
,
AR Webster
,
CA Orengo
,
PT Khaw
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DOI
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