Determining the functional disparty between CRB1 variants causing LCA and RP

CRB1-related eye disease is a rare genetic disorder that affects the retina, the light-sensitive layer of tissue at the back of the eye 1. The CRB1 gene provides instructions for making a protein that is essential for the normal development and function of the retina. This protein helps to regulate the number and arrangement of light-sensitive cells in the retina. Variants in CRB1 disrupt the normal function of this protein, leading to the death of light-sensitive cells and as a result, people with CRB1 eye disease experience a progressive loss of vision. There is currently no cure for this disorder 2.

<em>CRB1</em> genetic variants
CRB1 genetic variants source: gnomAD

Leber’s congenital atrophy (LCA) is a form of inherited blindness that is caused by the death of photoreceptor cells in the retina. Retinitis pigmentosa (RP) is another inherited blindness that is caused by the degeneration of the retina. Both conditions can result from variants in CRB1 and may lead to complete blindness. How the distinct phenotypes result from variants in the same gene still remains unclear.

I use model systems to investigate several aspects of CRB1-related eye disease:

  • Using the zebrafish crb2a -/- null model, I am studing how the transcriptome of the retina differences compared to wildtype controls. This has provided us key insights into the molecular changes resulting from loss of crb2a, and has identified a novel control mechanism for this disease.

The zebrafish eye
The zebrafish eye

  • Cell lines are often a vital resource for research, especially those generated from tissue kindly provided by patients. We are in the fortunate position of having a patient kindly donate a skin biopsy to allow us to generate induce pluoripotent stem cells (iPSC). We can reprogramme these cells into different cell types and use them for downstream analysis. Reprogramming into 3D retinal organoids, early eye cups, gives us a fantastic model in which to assess molecular and cellular changes caused by the variants in the CRB1 gene.

3D retinal organoid
3D Retinal Organoid of a CRB1 line
3D retinal organoid
Gene Ontology Enrichment Analysis of crb2a -/- retina transcrtipomes.

We hope to assess several CRB1 patients with different variants to give us an insight into how genetic differences within the same gene could result in the varied phenotype (LCA/RP).

Wellcome Trust

Nicholas Owen
Nicholas Owen
Research Fellow and Bioinformatician

My interests include rare disease translational research using ‘omics analysis.